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human colon cancer cell lines hct116  (ATCC)


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    Structured Review

    ATCC human colon cancer cell lines hct116
    Tissue specification of neutrophils in the CRLM microenvironment. A, Expression levels of CXCR4, CXCR2, and CXCR1 across each TAN and PMN subset. B, mIHC staining of MPO, CXCR1, CXCR2, and CXCR4 in colorectal cancer and CRLM tissues. Scale bar, 50µm. C, Quantitative analysis of the percentage of CXCR1 + , CXCR2 + , and CXCR4 + neutrophils in paired colorectal cancer and CRLM tissues ( n = 5). D, Heatmap showing the mean strength of chemokine–receptor axis for each TAN subset in CRLM tissues. E, Predicted ordering of each TAN subset by CytoTRACE analysis using scRNA-seq dataset. F, Monocle 2 trajectory analysis of TAN subsets differentiation using the scRNA-seq dataset. Cells are colored by pseudotime, ordering predicted by CytoTRACE, and cell types. G, The density of each TAN subset along pseudotime. H, Clustering analysis of gene expression along pseudotime, with pathway enrichment analysis of four gene sets based on pseudotime. I, TAN1 similarity scores of TAN0_ELL2, TAN2_HSPA1B, TAN3_IFIT2, and TAN4_ARG1 across colorectal cancer, adjacent liver tissues (LP), and CRLM tissues. The TAN1 similarity score was calculated based on the top 50 differentially expressed genes in TAN1. J, Relative mRNA expression levels of BHLHE40 , CDKN1A (p21), LGALS3 , VEGFA , and LDHA as determined by qPCR in control neutrophils or neutrophils cocultured with <t>HCT116</t> or DLD-1 cells. K and L, Flow cytometry analysis of Gal3 surface expression in neutrophils cultured alone (control) or cocultured with DLD-1 ( K ) or HCT116 cells ( L ). P values were determined by paired Student t test ( C ) or unpaired Student t test ( J , K , and L ). n.s., not significant; **, P < 0.01; ***, P < 0.001. CRC, colorectal cancer; Ctrl, control; MFI, mean fluorescence intensity.
    Human Colon Cancer Cell Lines Hct116, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 4101 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/human+colon+cancer+cells+hct116/HCT+116/pmc13628106-192-1-36
    Average 99 stars, based on 4101 article reviews
    human colon cancer cell lines hct116 - by Bioz Stars, 2026-11
    99/100 stars

    Images

    1) Product Images from "Senescent-Like Neutrophils Shape Angiogenic Immunosuppressive Niches in Colorectal Cancer Liver Metastasis"

    Article Title: Senescent-Like Neutrophils Shape Angiogenic Immunosuppressive Niches in Colorectal Cancer Liver Metastasis

    Journal: Cancer Discovery

    doi: 10.1158/2159-8290.CD-25-0820

    Tissue specification of neutrophils in the CRLM microenvironment. A, Expression levels of CXCR4, CXCR2, and CXCR1 across each TAN and PMN subset. B, mIHC staining of MPO, CXCR1, CXCR2, and CXCR4 in colorectal cancer and CRLM tissues. Scale bar, 50µm. C, Quantitative analysis of the percentage of CXCR1 + , CXCR2 + , and CXCR4 + neutrophils in paired colorectal cancer and CRLM tissues ( n = 5). D, Heatmap showing the mean strength of chemokine–receptor axis for each TAN subset in CRLM tissues. E, Predicted ordering of each TAN subset by CytoTRACE analysis using scRNA-seq dataset. F, Monocle 2 trajectory analysis of TAN subsets differentiation using the scRNA-seq dataset. Cells are colored by pseudotime, ordering predicted by CytoTRACE, and cell types. G, The density of each TAN subset along pseudotime. H, Clustering analysis of gene expression along pseudotime, with pathway enrichment analysis of four gene sets based on pseudotime. I, TAN1 similarity scores of TAN0_ELL2, TAN2_HSPA1B, TAN3_IFIT2, and TAN4_ARG1 across colorectal cancer, adjacent liver tissues (LP), and CRLM tissues. The TAN1 similarity score was calculated based on the top 50 differentially expressed genes in TAN1. J, Relative mRNA expression levels of BHLHE40 , CDKN1A (p21), LGALS3 , VEGFA , and LDHA as determined by qPCR in control neutrophils or neutrophils cocultured with HCT116 or DLD-1 cells. K and L, Flow cytometry analysis of Gal3 surface expression in neutrophils cultured alone (control) or cocultured with DLD-1 ( K ) or HCT116 cells ( L ). P values were determined by paired Student t test ( C ) or unpaired Student t test ( J , K , and L ). n.s., not significant; **, P < 0.01; ***, P < 0.001. CRC, colorectal cancer; Ctrl, control; MFI, mean fluorescence intensity.
    Figure Legend Snippet: Tissue specification of neutrophils in the CRLM microenvironment. A, Expression levels of CXCR4, CXCR2, and CXCR1 across each TAN and PMN subset. B, mIHC staining of MPO, CXCR1, CXCR2, and CXCR4 in colorectal cancer and CRLM tissues. Scale bar, 50µm. C, Quantitative analysis of the percentage of CXCR1 + , CXCR2 + , and CXCR4 + neutrophils in paired colorectal cancer and CRLM tissues ( n = 5). D, Heatmap showing the mean strength of chemokine–receptor axis for each TAN subset in CRLM tissues. E, Predicted ordering of each TAN subset by CytoTRACE analysis using scRNA-seq dataset. F, Monocle 2 trajectory analysis of TAN subsets differentiation using the scRNA-seq dataset. Cells are colored by pseudotime, ordering predicted by CytoTRACE, and cell types. G, The density of each TAN subset along pseudotime. H, Clustering analysis of gene expression along pseudotime, with pathway enrichment analysis of four gene sets based on pseudotime. I, TAN1 similarity scores of TAN0_ELL2, TAN2_HSPA1B, TAN3_IFIT2, and TAN4_ARG1 across colorectal cancer, adjacent liver tissues (LP), and CRLM tissues. The TAN1 similarity score was calculated based on the top 50 differentially expressed genes in TAN1. J, Relative mRNA expression levels of BHLHE40 , CDKN1A (p21), LGALS3 , VEGFA , and LDHA as determined by qPCR in control neutrophils or neutrophils cocultured with HCT116 or DLD-1 cells. K and L, Flow cytometry analysis of Gal3 surface expression in neutrophils cultured alone (control) or cocultured with DLD-1 ( K ) or HCT116 cells ( L ). P values were determined by paired Student t test ( C ) or unpaired Student t test ( J , K , and L ). n.s., not significant; **, P < 0.01; ***, P < 0.001. CRC, colorectal cancer; Ctrl, control; MFI, mean fluorescence intensity.

    Techniques Used: Tissue, Expressing, Staining, Analysis, Gene Expression, Control, Flow Cytometry, Cell Culture, Fluorescence

    Related Articles

    Activity Assay:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Derivative Assay:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Sulforhodamine B Assay:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Control:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Concentration Assay:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Formulation:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Inhibition:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Staining:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Expressing:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Western Blot:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Clonogenic Cell Survival Assay:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Cytometry:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Software:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Comparison:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Cell Culture:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Incubation:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Microscopy:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Immunohistochemistry:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Migration:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    MANN-WHITNEY:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Clone Assay:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    shRNA:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Injection:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    In Vivo Imaging:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Phospho-proteomics:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Quantitative Proteomics:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.

    Immunoprecipitation:

    Article Title: Glucomannan polysaccharides derived from Pediococcus pentosaceus: From molecular characteristics to inhibition on colonic cancer cells proliferation.
    Article Snippet: Extracellular polysaccharides (EPS) from Pediococcus pentosaceus were obtained, followed by investigation of their structural and functional properties.. Current results indicated the polysaccharides belonged to glucomannans, which mainly consisted of mannose and glucose with a molecular weight of 2248.71 kDa.. NMR analysis suggested that the backbone of EPS-2 fraction included 1,2-α-Manp, 1,3-α-Manp, 1,2,6-α-Manp, 1,6α-Glcp and 1,4-α-Glcp, whereas its side chain consisted of T-α-Manp residues.



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    Tissue specification of neutrophils in the CRLM microenvironment. A, Expression levels of CXCR4, CXCR2, and CXCR1 across each TAN and PMN subset. B, mIHC staining of MPO, CXCR1, CXCR2, and CXCR4 in colorectal cancer and CRLM tissues. Scale bar, 50µm. C, Quantitative analysis of the percentage of CXCR1 + , CXCR2 + , and CXCR4 + neutrophils in paired colorectal cancer and CRLM tissues ( n = 5). D, Heatmap showing the mean strength of chemokine–receptor axis for each TAN subset in CRLM tissues. E, Predicted ordering of each TAN subset by CytoTRACE analysis using scRNA-seq dataset. F, Monocle 2 trajectory analysis of TAN subsets differentiation using the scRNA-seq dataset. Cells are colored by pseudotime, ordering predicted by CytoTRACE, and cell types. G, The density of each TAN subset along pseudotime. H, Clustering analysis of gene expression along pseudotime, with pathway enrichment analysis of four gene sets based on pseudotime. I, TAN1 similarity scores of TAN0_ELL2, TAN2_HSPA1B, TAN3_IFIT2, and TAN4_ARG1 across colorectal cancer, adjacent liver tissues (LP), and CRLM tissues. The TAN1 similarity score was calculated based on the top 50 differentially expressed genes in TAN1. J, Relative mRNA expression levels of BHLHE40 , CDKN1A (p21), LGALS3 , VEGFA , and LDHA as determined by qPCR in control neutrophils or neutrophils cocultured with HCT116 or DLD-1 cells. K and L, Flow cytometry analysis of Gal3 surface expression in neutrophils cultured alone (control) or cocultured with DLD-1 ( K ) or HCT116 cells ( L ). P values were determined by paired Student t test ( C ) or unpaired Student t test ( J , K , and L ). n.s., not significant; **, P < 0.01; ***, P < 0.001. CRC, colorectal cancer; Ctrl, control; MFI, mean fluorescence intensity.

    Journal: Cancer Discovery

    Article Title: Senescent-Like Neutrophils Shape Angiogenic Immunosuppressive Niches in Colorectal Cancer Liver Metastasis

    doi: 10.1158/2159-8290.CD-25-0820

    Figure Lengend Snippet: Tissue specification of neutrophils in the CRLM microenvironment. A, Expression levels of CXCR4, CXCR2, and CXCR1 across each TAN and PMN subset. B, mIHC staining of MPO, CXCR1, CXCR2, and CXCR4 in colorectal cancer and CRLM tissues. Scale bar, 50µm. C, Quantitative analysis of the percentage of CXCR1 + , CXCR2 + , and CXCR4 + neutrophils in paired colorectal cancer and CRLM tissues ( n = 5). D, Heatmap showing the mean strength of chemokine–receptor axis for each TAN subset in CRLM tissues. E, Predicted ordering of each TAN subset by CytoTRACE analysis using scRNA-seq dataset. F, Monocle 2 trajectory analysis of TAN subsets differentiation using the scRNA-seq dataset. Cells are colored by pseudotime, ordering predicted by CytoTRACE, and cell types. G, The density of each TAN subset along pseudotime. H, Clustering analysis of gene expression along pseudotime, with pathway enrichment analysis of four gene sets based on pseudotime. I, TAN1 similarity scores of TAN0_ELL2, TAN2_HSPA1B, TAN3_IFIT2, and TAN4_ARG1 across colorectal cancer, adjacent liver tissues (LP), and CRLM tissues. The TAN1 similarity score was calculated based on the top 50 differentially expressed genes in TAN1. J, Relative mRNA expression levels of BHLHE40 , CDKN1A (p21), LGALS3 , VEGFA , and LDHA as determined by qPCR in control neutrophils or neutrophils cocultured with HCT116 or DLD-1 cells. K and L, Flow cytometry analysis of Gal3 surface expression in neutrophils cultured alone (control) or cocultured with DLD-1 ( K ) or HCT116 cells ( L ). P values were determined by paired Student t test ( C ) or unpaired Student t test ( J , K , and L ). n.s., not significant; **, P < 0.01; ***, P < 0.001. CRC, colorectal cancer; Ctrl, control; MFI, mean fluorescence intensity.

    Article Snippet: The human colon cancer cell lines HCT116 (RRID: CVCL_0291) and DLD-1 (RRID: CVCL_0248), mouse colon cancer cell line CT26 (RRID: CVCL_7254), as well as the human neutrophil cell line HL-60 (RRID: CVCL_0002) were obtained from the American Type Culture Collection.

    Techniques: Tissue, Expressing, Staining, Analysis, Gene Expression, Control, Flow Cytometry, Cell Culture, Fluorescence